MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Pasteurella sp.
19428wF3_WM03
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 32
bases: 2,266,646 bps
CDS: 2,120
rRNA: 7
Repeat region:
tmRNA: 1
tRNA: 52
misc RNA:
Total features: 2,180
Total number of protein coding genes annotated/found:
2,120
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 107 pages
Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5022|JADGKV010000001.1
SEQF5022_00729
Genome Viewer
NA
AA
222/74
423754-423533
hypothetical protein
SEQF5022|JADGKV010000001.1
SEQF5022_00728
Genome Viewer
NA
AA
558/186
423205-422648
Der GTPase-activating protein YihI
SEQF5022|JADGKV010000001.1
SEQF5022_00727
Genome Viewer
NA
AA
447/149
422644-422198
hypothetical protein
SEQF5022|JADGKV010000001.1
SEQF5022_00726
Genome Viewer
NA
AA
1368/456
422198-420831
Oxygen-independent coproporphyrinogen III oxidase
SEQF5022|JADGKV010000001.1
SEQF5022_00725
Genome Viewer
NA
AA
558/186
420654-420097
Ribosome-recycling factor
SEQF5022|JADGKV010000001.1
SEQF5022_00724
Genome Viewer
NA
AA
1266/422
420084-418819
1-deoxy-D-xylulose 5-phosphate reductoisomerase
SEQF5022|JADGKV010000001.1
SEQF5022_00723
Genome Viewer
NA
AA
720/240
418791-418072
Ditrans%2Cpolycis-undecaprenyl-diphosphate synthase ((2E%2C6E)-farnesyl-diphosphate specific)
SEQF5022|JADGKV010000001.1
SEQF5022_00722
Genome Viewer
NA
AA
867/289
418060-417194
Phosphatidate cytidylyltransferase
SEQF5022|JADGKV010000001.1
SEQF5022_00721
Genome Viewer
NA
AA
1332/444
417184-415853
Regulator of sigma-E protease RseP
SEQF5022|JADGKV010000001.1
SEQF5022_00720
Genome Viewer
NA
AA
2397/799
415818-413422
Outer membrane protein assembly factor BamA
SEQF5022|JADGKV010000001.1
SEQF5022_00719
Genome Viewer
NA
AA
609/203
413319-412711
Outer membrane protein 26
SEQF5022|JADGKV010000001.1
SEQF5022_00718
Genome Viewer
NA
AA
1035/345
412698-411664
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
SEQF5022|JADGKV010000001.1
SEQF5022_00717
Genome Viewer
NA
AA
450/150
411456-411007
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
SEQF5022|JADGKV010000001.1
SEQF5022_00716
Genome Viewer
NA
AA
789/263
410992-410204
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
SEQF5022|JADGKV010000001.1
SEQF5022_00715
Genome Viewer
NA
AA
1173/391
410098-408926
Lipid-A-disaccharide synthase
SEQF5022|JADGKV010000001.1
SEQF5022_00714
Genome Viewer
NA
AA
600/200
408933-408334
Ribonuclease HII
SEQF5022|JADGKV010000001.1
SEQF5022_00713
Genome Viewer
NA
AA
1857/619
408323-406467
hypothetical protein
SEQF5022|JADGKV010000001.1
SEQF5022_00712
Genome Viewer
NA
AA
594/198
406431-405838
Molybdopterin adenylyltransferase
SEQF5022|JADGKV010000001.1
SEQF5022_00711
Genome Viewer
NA
AA
339/113
405836-405498
Nitrogen regulatory protein P-II 1
SEQF5022|JADGKV010000001.1
SEQF5022_00710
Genome Viewer
NA
AA
1044/348
405498-404455
Putative transport protein YhhT
Items 1 - 20
🡆
click arrow to navigate by page or
of 107 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
